T-10 | People | Scientific/Technical Roster | Profile
 
 
Robert K. Funkhouser
Technician
B.S. I. E. (Industrial Engineering), 1974, Purdue University

MS K710, T-10
Theoretical Division
Los Alamos National Laboratory
Los Alamos, NM 87545

Tel: 505/667-4142
Fax: 505/665-3493
E-mail: funkhouser@lanl.gov 		 
 

Research Interests

  • Database Software
  • HIV bioinformatics

My primary interest is database driven websites supporting HIV research. I also write ad hoc bioinformatics programs in Perl.

 

Publications

  1. William Fischer, Simon Perkins, James Theiler, Tanmoy Bhattacharya, Karina Yusim, Robert Funkhouser, Carla Kuiken, Barton Haynes, Norman L. Letvin, Bruce D. Walker, Beatrice H. Hahn, Bette Korber. Designing polyvalent HIV-1 vaccines for optimal coverage of potential T-cell epitopes in diverse global variants. Nature Med, in press, 2006. LA-UR-06-3608.

  2. Yusim K, Richardson R, Tao N, Dalwani A, Agrawal A, Szinger J, Funkhouser R, Korber B, Kuiken C. Los alamos hepatitis C immunology database. Appl Bioinformatics. 2005;4(4):217-25. PMID: 16309340 LAUR 04-7030.

  3. Yusim K, R Richardson, N Tao, J Szinger, R Funkhouser, B Korber, C Kuiken. The Los Alamos Hepatitis C Immunology Database (in press, Bioinformatics, January 2005). LAUR 04-7030.

  4. Trachtenberg E*, Korber B*, Sollars C, Kepler TB, Hraber PT, Hayes E, Funkhouser R, Fugate M, Theiler J, Hsu YS, Kunstman K, Wu S, Phair J, Erlich H, Wolinsky S. Advantage of rare HLA supertype in HIV disease progression. Nat Med. 2003 Jul;9(7):928-35. *These two authors contributed equally to this paper. PMID: 12819779.

  5. Goulder PJ, Brander C, Tang Y, Tremblay C, Colbert RA, Addo MM, Rosenberg ES, Nguyen T, Allen R, Trocha A, Altfeld M, He S, Bunce M, Funkhouser R, Pelton SI, Burchett SK, McIntosh K, Korber BT, Walker BD. Evolution and transmission of stable CTL escape mutations in HIV infection. Nature. 2001 Jul 19;412:334-8. PMID: 11460164.

  6. Robertson DL, Anderson JP, Bradac JA, Carr JK, Foley B, Funkhouser RK, Gao F, Hahn BH, Kalish ML, Kuiken C, Learn GH, Leitner T, McCutchan F, Osmanov S, Peeters M, Pieniazek D, Salminen M, Sharp PM, Wolinsky S, Korber B. HIV-1 nomenclature proposal. Science. 2000 Apr 7;288:55. PMID: 10766634.

  7. Robertson D, Anderson J, Bradac J, Carr J, Foley B, Funkhouser R, Gao F, Hahn B, Kalish M, Kuiken C, Learn G, Leitner T, McCutchan F, Osmanov S, Peeters M, Pieniazek D, Salminen M, Sharp P, Wolinsky S, Korber BT. HIV-1 Nomenclature Proposal, A Reference Guide to HIV-1 Classification Part IV, 492 in: Human Retro and AIDS 1999: A Compilation and Analysis of Nucleic Acid and Amino Acid Sequences. Editors: Kuiken CL, Foley B, Hahn B, Korber BT, McCutchan F, Marx PA, Mellors JW, Mullins JI, Sodroski J, Wolinksy S, Eds. Theoretical Biology and Biophysics Group, Los Alamos National Laboratory, Los Alamos, NM (1999).

 

Books

  1. IBM Basic for Business and Home, Robert Funkhouser, Reston Publishing Company, Inc, 1983.
 

Other Interests