LOCUS GORHBBPG 7055 bp ds-DNA PRI 13-JUL-1993 DEFINITION Gorilla beta-globin and eta-globin pseudogenes and an Alu repeat. ACCESSION K02543 M18037 KEYWORDS Alu repeat; globin; hemoglobin; pseudogene. SOURCE Lowland gorilla (Gorilla gorilla gorilla; SF-4) blood DNA, clone Ggo lambda-1059-1.1 [1]. ORGANISM Gorilla gorilla Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Pongidae. REFERENCE 1 (bases 1613 to 3763) AUTHORS Chang,L.Y. and Slightom,J.L. TITLE Isolation and nucleotide sequence analysis of the beta-type globin pseudogene from human, gorilla and chimpanzee JOURNAL J. Mol. Biol. 180, 767-784 (1984) STANDARD full automatic REFERENCE 2 (bases 1613 to 3763) AUTHORS Koop,B.F., Goodman,M., Xu,P., Chan,K. and Slightom,J.L. TITLE Primate eta-globin DNA sequences and man's place among the great apes JOURNAL Nature 319, 234-238 (1986) STANDARD full automatic REFERENCE 3 (bases 1 to 7055) AUTHORS Miyamoto,M.M., Slightom,J.L. and Goodman,M. TITLE Phylogenetic relations of humans and African apes from DNA sequences in the pseudo-eta-globin region JOURNAL Science 238, 369-373 (1987) STANDARD full automatic COMMENT [3] revises [1],[2]. Computer-readable sequence for [3] kindly provided by M.M.Miyamoto, 6-FEB-1988. FEATURES Location/Qualifiers CDS join(1988..2078,2200..2422,3274..3400) /pseudo /gene="pseudo-beta-globin" /codon_start=1 repeat_region 1067..1391 /note="Alu repeat" repeat_region 1814..1852 /note="direct degenerate repeat copy A" repeat_region 1853..1889 /note="direct degenerate repeat copy B" mRNA 1935..3667 /note="pseudo-beta-globim mRNA" exon 2200..2422 /pseudo /number=2 /note="pseudo-beta-globin" source 1..7055 /organism="Gorilla gorilla" /isolate="SF-4" /sub_species="gorilla" /sequenced_mol="DNA" /tissue_type="blood" BASE COUNT 2215 a 1315 c 1439 g 2086 t ORIGIN 1 bp upstream of EcoRI site. 1 gaattcctgg ttggctgatg gaagatgggg caactgttca ctggtatgca gggttttaga 61 tgtatgtacc taaggatatg aggtatggca atgaacagaa attcttttgg gaatgagttt 121 tagggccatt aaaggacatg acctgaagtt tcctctcagg ccagtcccca caactcaata 181 taaatgtgtt tcctgcatac agtcaaagtt gccacttctt tttcttcata tcatcgatct 241 ctgctcttaa agataatctt ggttttgcct caaactgttt gtcactacaa actttcccca 301 tgttcctaag taaaacagat aactgcctct caactatatc aagtagacta aaatattgtg 361 tctctaatat cagaaattca gctttaatat attgggttta actctttgaa atttagagta 421 tccttgaaat acacatgggg gtgatttcct aaactttatt tcttgtaagg atttatctca 481 ggggtaacac acaaaccagc atcctgaacc tctaagtatg aggacagtaa gccttaagaa 541 tataaaataa actgttattc tctctgccgg tgcaagtgcg ccctgtctat tcctgaaatt 601 gctcgtttga gacgcatgag acgtgcagca catgagacac gtgcagcagc ctgtggaata 661 ttgtcagtga agaatgtctc tgcctgatta gatataaaga caagttaaac acagcattag 721 actatagctc aagcctgtgc cagacacaaa tgacctaatg cccagcatgg gccatggaat 781 ctcctatcct cttgcttgaa cagagcagca cacttctccc ccaacactat tagatgttct 841 ggcataattt tgtagatatg taggatttga catggactat tgttcaatga ttcagaggaa 901 atctcctttg ttcagataag tacactgact actaaatgga ttaaaaaaca cagtaataaa 961 acccagtttt ccccttattt ccctagtttg tttcttattc tgctttcttc caaattgatg 1021 ctggatagag gtgtttattt ctattctaaa aagtgatgaa attggccggg cgcggtggct 1081 cacacctgta atcccagcac tttgggaggc tgaggtgggc ggatcacgag gtcaggagat 1141 caagaccatc ctggctaaca tggtgaaacc ccatctctac taaaaataca aaaaaattag 1201 ccagagacgg tggcgggtgc ctgtagtccc agctactcgg gaggctgagg caggagaatg 1261 gtgtgaacct gggaggcaga gcttgcagtg agcagagatc gtgccactgc acactccagc 1321 ctgggtgaca aagcaagact ccatctcaaa aaaaaaaaaa aaaagaaaga aagaaagaaa 1381 gaaaaataaa ggtgatgaaa ttgtgtattc aatgtagtct caagagaatt gaaaaccaag 1441 aaaggctgtg gcttcttcca cataaaacct ggatgaataa caggataaca cgtcgttaca 1501 ttgtcacaac tcctgatcca ggaattgatg gctaagatat tcgtaattct tatccttttc 1561 agttgtaact tattcctatt tgtcagcatt caggttatta gcggccgctg gcgaagtcct 1621 tgagaaataa actgcacact ggacggtggg gatagcgtag gaaaatggag gggaaggaag 1681 taaagttcca aattaagcct gaacagcaaa gttcccctga gaaggccacc tggattctat 1741 cagaaactcg aatgtccatc ttgcaaaact tccttgccca aaccccaccc ctggagtcac 1801 aacccaccct tgaccaatag attcatttca ctaagagaag caaagggctg gtcaatggat 1861 tcatttcact gggagaggca aagggctggg ggccagagag gagaagtaaa aagccacaca 1921 tgaagcagca atgcaggcat gtttctggct catctgtgat caccaggaaa ctcccagatc 1981 tgacactgta gtgcatttca ctgctgacaa gaaggctgct gccaccagcc tgtgaagcaa 2041 ggttaaggtg agaaggctgg aggtgagatt ctgggcaggt aggtactgga agccggggca 2101 aggtgcagaa aggcagaaag tgtttctgaa agagggatta gcccattgtc ttacatagtc 2161 tgactttgca cctgctctgt gattatgact atcccacagt ctcctggttg tctacccatg 2221 gacctagagg tactttgaaa gttttggata tctgggctct gactgtgcaa taatgggcaa 2281 ccccaaagtc aaggcacatg gcaagaaggt gctgatctcc ttcggaaaag ctgttatgct 2341 cacggatgac ctcaaaggca cctttgctac gctgagtgac ctgcactgta acaagctgca 2401 cgtggaccct gagaacttcc tggtgagtac taagtacact cacactttct tctttaccct 2461 tagatatttg cactatgggc acttttgaaa gcagaggtgg ctttctcttg tgttatgagt 2521 cagctgtggg atataatatt tcagcagtgg gattttgaga gttatgttgc tgtaaataac 2581 ataactaaaa tttggtagag caaggactac gaataatgga aggccactta ccatttgata 2641 gctctgaaaa acacatctta taaaaaattc tggccaaaat caaactgagt gtttttggat 2701 gagggaacag aagttgagat agagaaaata acatctttcc tttggtcagc gaaattttct 2761 ataaaaatta atagtcactt ttcttcatag tcctggaggt tagaaaaaga tcaactgaac 2821 aaagtagtgg gaagctgtta aaaagaggat tgtttccctc ctaatgatga tggtatactt 2881 ttgtacgcat ggtacaggat tctttgttat gagtgtttgg gaaaattgta tgtatgtatg 2941 tatgtgatga ctggggactt atcctatcca ttactgttcc ttgaagtact attatcctac 3001 tttttaaaag gacgaagtct ctaaaaaaaa tgaaacaatt aatcacaata tgctggggta 3061 gtgagttggc atagcaagta agagaaggat aggacacaat gggaggtgca gggctgccag 3121 tcatattgaa gctgatatct agcccataat ggtgagagtt gctcaaactc tggtcaaaaa 3181 ggatgtaagt gttatatcta tttactgcaa gtccagcttg aggccttcta ttcactatgt 3241 accattttct ttttatcttc actccctccc cagctcttag gcaacgtgat attgattgtt 3301 ttggcaaccc acttcagcga ggagtttacc ctacagatac aggcttcctg gcagtaacta 3361 acaaatgctg tggttaatgc tgtagcccac aagaccactg agtcccctgt ccactatgtt 3421 tgtacctact ggtccactat gtttgtacct atgtccccaa atctcatctc ctttagatgg 3481 gggaggttgg ggagaagagc agtatcctgc ctgctgattc agttcctgca tgataaaaat 3541 aaaataaaga aatatgctct ctaagaaata tcattgtatt ctttttctgt ctttatattt 3601 taccctgatt cagccaaaag gacgcaccat ttctgatgga aatgagaatg ttggagaatg 3661 ggagcttaag gacagagaag atactttctt gcaatcctgc aagaaaagag agaacttgtg 3721 ggttgattta gtggggtagt tactcctagg aaggggaaat cgtctctaga ataagacaat 3781 gtctttacag aaagggaggt caatggaggt actctttgga gatgtaagag gattgttggt 3841 agtgtgtaga ggtatgttag gactcaaatt agaagttctg tataggctat tatttgtatg 3901 aactcaggat acagctcatt tggtgactgc agttcacttc tacttatttt gaacaacata 3961 ttttttatga cttataatga agtggggatg gggcttccta gagaccaatc aagggccaaa 4021 ccttgaactt tctcttaacg tcttcaatgg tattaataga gaattatctc taaggcatgt 4081 gaactggctg tcttggtttt catctgtact tcatctgcta cctctgtgac ctgaaacata 4141 tttataattc cattaagctg tacatatgat agatttatca tatttatttt ccttaaagga 4201 tttttgtaag aacgaattga attgatacct gtaaagtctt tatcacacta cccgataaat 4261 aataaatctc tttgttcagc tctctgtttc tataaatatg tacaagtttt attgttttta 4321 gtggtagtga ttttattctc tttctatata tatatataca catatgtgtg cattcataaa 4381 tatatacaat ttttatgaat aaaaaattat tagcaatcaa tattgaaaac cactgatttt 4441 tgtttatgtg agtaaacagc agattaaaag gctgagattt aggaaacagc acgttaagtc 4501 aagttgatag aggagaatat ggacatttaa aagaggcagg atgatataaa attagggaaa 4561 ctggatgcag agaccagatg aagtaagaaa aatagctatt gttttgagca aaaatcactg 4621 aagtttctcg catatgagag tgacataata aatagggaaa tgtagaaaat tgattcacat 4681 gtatatatat atatagaact gattagacaa agtctaactt gggtatagtc agaggagctt 4741 gctgtaatta tattgaggtg atggataaag aactgaagtt gatggaaaca atgaagttaa 4801 gaaaaaaaat cgagtaagag accactgtgg cagtgattgc acagaactgg aaaacactgt 4861 gaaacagaga gtcagagatg acagctaaaa tccctgcctg tgaatgaaaa gaaggaaatt 4921 tattgacaga acagcaaatg cctacaagcc ccctgtttgg atctggcaat gaacatagtc 4981 attctgtggc aatcacttca aactcctgta cccaagaccc ttaggaagta tgtagcaccc 5041 tcaaacctaa aacctcaaag aaagaggttt tagaagatat aatatccttt cttctccagt 5101 ttcattaatc cccaagcctc tttctcaaag tatttcctct atgtgtccac cccaaagagc 5161 tcacctcacc atatctcttg agtgggagca catagatagg cggtgctacc atctgacagc 5221 ttctgaaatt cctttgtcat atttttgagt ccccactaat aacccacaaa gcagaataaa 5281 taacagttgc tcatgtacaa taatcactca actgctgtct tgtagcatac attaattaag 5341 cacattcttt gaataattac tgtgtccaaa caatcacact ttaaaatctc acacttatgc 5401 tatcccttgc ccttctgaat gtcactctgt attttaaatt aagagaggag ggttgaattt 5461 cctgtgttac ttattgttca tttctcgatg aggagttttc acattcacct ttactggaaa 5521 acacataagc acacatctta caggaaaaat ataccaaact gacatgtagc atgaatgctt 5581 gtgcatgtag tcatataaaa tcttgtagca atgtaaacat tctctgatat acacatacag 5641 atgtgtctat atgtctacac aatttcttat gctccatgaa caaacattcc atgcacacat 5701 aagaacacac actgttacag atgcatactt gagtgcattg acaaaattac cccagtcaat 5761 ctagagaatt tggatttctg catttgactc tgttagcttt gtgcatgctg ttcatttact 5821 ctgggtgatg tctttccctc attttgccct gtctatcttg tactcatact ttaagtccta 5881 acttatatgc tatctcaatt aagaagctat ttttttttaa attttaactg ggcttaaagc 5941 cctgtctata aactctgcta caattatggg ctctttctta taatatttag tgtttttcct 6001 actaatgtac ttaatctgct cattgtatct tcctaccact aaattttaac ctcatttatg 6061 gtagagacat tgtcttgtaa actcttattt ccctagtatt tggagatgaa aaaaaaagat 6121 taaattatcc aaaattagat ctctcttttc tacattatga gtattacact atccatagag 6181 aagtttgttt gagacctaaa ctgaggaacc tttggttcta aaatgactat gtgatatctt 6241 agtatttgta ggtcatgagg ttccttcctc tgcctctata aggctgttcc ctcaatctcc 6301 cttgctatag tttgattagt caacaagcat gtgtcatgca tttattcaca tcagaatttt 6361 catacactaa taagacatag tatcagaagt cagtttatta gttatatcag ttagggtcca 6421 tcaaggaaag gacaaaccat tatcagttac tcaacctaga attaaataca gctcttaata 6481 gttaattatc cttgtattgg aagagctaaa atatcaaata aaggacagtg cagaaatcta 6541 gatgttagta acatcagaaa acctcttccg ccattaggcc tagaagggca gaaggagaaa 6601 atgtttatac caccagagtc cagaaccaga gaccataacc agaggtccac tggattcagt 6661 gagctagtgg gggctccttg gagagagcca gaactaggtg tctaatgggg gtatcaaaat 6721 atcagccata aaaaaccata aaaaagactg tctgctgtag gagatctgtt cagagagaga 6781 gagagacaag aaataatctt gcttatgctt tccctcagcc agtgtttacc actgcagaat 6841 gtacatgcaa ctgaaagggt gaggaaacct gggaaatgtc agttcctcaa atacagagaa 6901 cactgaggga aggatgagaa ataaatttga aagcagacat gaatggtaat tgacagaagg 6961 aaactaggat gtgtccagta aatgaataat tacagtgtgc agtgattatt gcaatgatta 7021 atgtattgat aagataatat gaaaacacag aattc //